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author:

Fan, Longxing (Fan, Longxing.) [1] | Peng, Yuan (Peng, Yuan.) [2] | Ning, Baoan (Ning, Baoan.) [3] | Wei, Haiping (Wei, Haiping.) [4] | Gao, Zhixian (Gao, Zhixian.) [5] | Bai, Jialei (Bai, Jialei.) [6] | Guo, Liangqia (Guo, Liangqia.) [7] (Scholars:郭良洽)

Indexed by:

EI Scopus SCIE

Abstract:

Multiplex DNA methylation and glycosylation are ubiquitous in the human body to ensure the normal function and stability of the genome. The methyltransferases and glycosylases rely on varied enzymes with different action mechanism, which still remain challenges for multiple detection. Herein, we developed a tri-functional dsDNA probe mediated exponential amplification strategy for sensitive detection of human DNA (cytosine-5) methyltransferase 1 (Dnmt1) and uracil-DNA glycosylase (UDG) activities. The tri-functional dsDNA probe was rationally designed with M-DNA and U-DNA. M-DNA contains the 5'-GCmGCGC-3' site for Dnmt1 recognition. U-DNA possesses one uracil as the substrate of UDG and a primer sequence for initiating the amplification reaction. M-DNA was complementary to partial sequence of U-DNA. In the presence of Dnmt1 and UDG, BssHII and Endo. were used to nick the 5'-GCGCGC-3' and AP sites respectively, resulting in the release of single-stranded DNA sequence (primer sequence), respectively. After magnetic separation, the released primer sequence hybridizes with padlock DNA (P-DNA), initiating exponential rolling circle amplification to produce numerous G-quad-ruplexes for recordable signals. The strategy exhibited the limit of detection as low as 0.009 U mL(-1) and 0.003 U mL(-1) for Dnmt1 and UDG, respectively. Meanwhile, this strategy was successfully applied to detect Dnmt1 and UDG activities in living cell samples at single-cell level and assay the inhibitors of Dnmt1 and UDG. Therefore, the strategy provided a potential method to detect Dnmt1 and UDG activities in biological samples for early clinic diagnosis and therapeutics. (c) 2019 Elsevier B.V. All rights reserved.

Keyword:

Amplification Dnmt1 and UDG activities Single-cell level Tri-functional probe

Community:

  • [ 1 ] [Fan, Longxing]Fuzhou Univ, Key Lab Analyt Sci Food Safety & Biol, Fujian Prov Key Lab Anal & Detect Technol Food Sa, Minist Educ,Coll Chem, Fuzhou 350116, Peoples R China
  • [ 2 ] [Guo, Liangqia]Fuzhou Univ, Key Lab Analyt Sci Food Safety & Biol, Fujian Prov Key Lab Anal & Detect Technol Food Sa, Minist Educ,Coll Chem, Fuzhou 350116, Peoples R China
  • [ 3 ] [Fan, Longxing]Tianjin Inst Environm & Operat Med, Tianjin Key Lab Risk Assessment & Control Technol, Tianjin 300050, Peoples R China
  • [ 4 ] [Peng, Yuan]Tianjin Inst Environm & Operat Med, Tianjin Key Lab Risk Assessment & Control Technol, Tianjin 300050, Peoples R China
  • [ 5 ] [Ning, Baoan]Tianjin Inst Environm & Operat Med, Tianjin Key Lab Risk Assessment & Control Technol, Tianjin 300050, Peoples R China
  • [ 6 ] [Wei, Haiping]Tianjin Inst Environm & Operat Med, Tianjin Key Lab Risk Assessment & Control Technol, Tianjin 300050, Peoples R China
  • [ 7 ] [Gao, Zhixian]Tianjin Inst Environm & Operat Med, Tianjin Key Lab Risk Assessment & Control Technol, Tianjin 300050, Peoples R China
  • [ 8 ] [Bai, Jialei]Tianjin Inst Environm & Operat Med, Tianjin Key Lab Risk Assessment & Control Technol, Tianjin 300050, Peoples R China

Reprint 's Address:

  • 郭良洽

    [Guo, Liangqia]Fuzhou Univ, Key Lab Analyt Sci Food Safety & Biol, Fujian Prov Key Lab Anal & Detect Technol Food Sa, Minist Educ,Coll Chem, Fuzhou 350116, Peoples R China;;[Gao, Zhixian]Tianjin Inst Environm & Operat Med, Tianjin Key Lab Risk Assessment & Control Technol, Tianjin 300050, Peoples R China;;[Bai, Jialei]Tianjin Inst Environm & Operat Med, Tianjin Key Lab Risk Assessment & Control Technol, Tianjin 300050, Peoples R China

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Source :

ANALYTICA CHIMICA ACTA

ISSN: 0003-2670

Year: 2020

Volume: 1103

Page: 164-173

6 . 5 5 8

JCR@2020

5 . 7 0 0

JCR@2023

ESI Discipline: CHEMISTRY;

ESI HC Threshold:160

JCR Journal Grade:1

CAS Journal Grade:2

Cited Count:

WoS CC Cited Count: 12

SCOPUS Cited Count: 12

ESI Highly Cited Papers on the List: 0 Unfold All

WanFang Cited Count:

Chinese Cited Count:

30 Days PV: 2

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