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author:

Li, Yurong (Li, Yurong.) [1] (Scholars:李玉榕) | Chen, Jun (Chen, Jun.) [2] | Jiang, Li (Jiang, Li.) [3] | Zeng, Nianyin (Zeng, Nianyin.) [4] | Jiang, Haiyan (Jiang, Haiyan.) [5] (Scholars:姜海燕) | Du, Min (Du, Min.) [6]

Indexed by:

EI Scopus SCIE

Abstract:

The tumour suppressor gene p53 plays a key role in cell response to DNA damage, and the p53-Mdm2 regulation relationship is crucial for the expression of p53. In this paper, based on gene expression timeseries data of human leukaemia cells after exposure to ionising radiation, with ionising radiation as input, a nonlinear continuous time-delay dynamic stochastic mathematical model of a p53-Mdm2 network is established using a continuous-discrete extended Kalman filter algorithm. The accuracy of the established model is then validated. Numerical simulation is used to simulate the dynamic regulation in p53-Mdm2 networks for low, medium, and high ionising radiation doses. The results show that the proposed algorithm is convergent and that the error rate of the model is only 1.19%. In addition, the model can simulate accurately the response of the p53-Mdm2 network to different doses of ionising radiation. The methods proposed in this paper can supply the foundation for research on the dynamics of the p53-Mdm2 gene regulation relationship and play a guiding role in research on the p53-Mdm2 response process after DNA damage under different doses of ionising radiation. (C) 2017 Elsevier B.V. All rights reserved.

Keyword:

Continuous-discrete extended Kalman filter algorithm p53-Mdm2 network Time-series data Modelling

Community:

  • [ 1 ] [Li, Yurong]Fuzhou Univ, Coll Elect Engn & Automat, Fuzhou 350116, Fujian, Peoples R China
  • [ 2 ] [Chen, Jun]Fuzhou Univ, Coll Elect Engn & Automat, Fuzhou 350116, Fujian, Peoples R China
  • [ 3 ] [Jiang, Li]Fuzhou Univ, Coll Elect Engn & Automat, Fuzhou 350116, Fujian, Peoples R China
  • [ 4 ] [Jiang, Haiyan]Fuzhou Univ, Coll Elect Engn & Automat, Fuzhou 350116, Fujian, Peoples R China
  • [ 5 ] [Li, Yurong]Fujian Key Lab Med Instrumentat & Pharmaceut Tech, Fuzhou 350116, Fujian, Peoples R China
  • [ 6 ] [Chen, Jun]Fujian Key Lab Med Instrumentat & Pharmaceut Tech, Fuzhou 350116, Fujian, Peoples R China
  • [ 7 ] [Jiang, Li]Fujian Key Lab Med Instrumentat & Pharmaceut Tech, Fuzhou 350116, Fujian, Peoples R China
  • [ 8 ] [Jiang, Haiyan]Fujian Key Lab Med Instrumentat & Pharmaceut Tech, Fuzhou 350116, Fujian, Peoples R China
  • [ 9 ] [Du, Min]Fujian Key Lab Med Instrumentat & Pharmaceut Tech, Fuzhou 350116, Fujian, Peoples R China
  • [ 10 ] [Zeng, Nianyin]Xiamen Univ, Dept Instrumental & Elect Engn, Xiamen 361005, Fujian, Peoples R China
  • [ 11 ] [Du, Min]Fujian Key Lab Ecoind Green Technol, Wuyishan 354300, Fujian, Peoples R China

Reprint 's Address:

  • 李玉榕

    [Li, Yurong]Fuzhou Univ, Coll Elect Engn & Automat, Fuzhou 350116, Fujian, Peoples R China

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Source :

NEUROCOMPUTING

ISSN: 0925-2312

Year: 2018

Volume: 273

Page: 230-236

4 . 0 7 2

JCR@2018

5 . 5 0 0

JCR@2023

ESI Discipline: COMPUTER SCIENCE;

ESI HC Threshold:174

JCR Journal Grade:1

CAS Journal Grade:2

Cited Count:

WoS CC Cited Count: 4

SCOPUS Cited Count: 4

ESI Highly Cited Papers on the List: 0 Unfold All

WanFang Cited Count:

Chinese Cited Count:

30 Days PV: 9

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