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author:

Xu, Huo (Xu, Huo.) [1] | Wu, Dong (Wu, Dong.) [2] | Li, Chen-Qiao (Li, Chen-Qiao.) [3] | Lu, Zheng (Lu, Zheng.) [4] | Liao, Xiao-Yun (Liao, Xiao-Yun.) [5] | Huang, Jie (Huang, Jie.) [6] | Wu, Zai-Sheng (Wu, Zai-Sheng.) [7]

Indexed by:

EI

Abstract:

Highly sensitive detection of K-ras gene is of great significance in biomedical research and clinical diagnosis. Here, we developed a colorimetric biosensing system for the detection of proto-oncogene K-ras based on enhanced amplification effect of DNA molecular machine, where dual isothermal circular strand-displacement amplification (D-SDA) occurs on two arms in one-to-one correspondence. Specifically, we designed a primer-locked hairpin probe (HP) and a primer-contained linear polymerization template (PPT). In the presence of target gene, HP can hybridize with PPT, forming a DNA molecular machine with dual functional arms (called DFA-machine). Each of the two probes in this machine is able to be extended by polymerase on its counterpart species. Moreover, with the help of nicking endonuclease, the dual isothermal polymerization is converted into dual circular strand-displacement amplification, generating a large amount of anti-hemin aptamer-contained products. After binding to hemins, the aptamer/hemin duplex, horseradish peroxidase (HRP)-mimicking DNAzyme, was formed and catalyzed the oxidation of colorless ABTS by H2O2, producing a visible green color. The proposed colorimetric assay exhibits a wide linear range from 0.01 to 150 nM with a low detection limit of 10 pM. More interestingly, the mutations existing in target gene are easily observed by the naked eye. It should be noted that this colorimetric system was proved by the analysis of K-ras gene of SW620 cell lines. The simple and powerful DFA-machine is expected to provide promising potential in the sensitive detection of biomarkers for cancer diagnosis, prognosis and therapy. © 2016 Elsevier B.V.

Keyword:

Cell culture Clinical research Color Colorimetric analysis Colorimetry Diagnosis Diseases DNA Genes Isotherms Polymerization Probes

Community:

  • [ 1 ] [Xu, Huo]Cancer Metastasis Alert and Prevention Center, Pharmaceutical Photocatalysis of State Key Laboratory of Photocatalysis on Energy and Environment, Fujian Provincial Key Laboratory of Cancer Metastasis Chemoprevention and Chemotherapy, College of Chemistry, Fuzhou University, Fuzhou; 350002, China
  • [ 2 ] [Wu, Dong]Cancer Metastasis Alert and Prevention Center, Pharmaceutical Photocatalysis of State Key Laboratory of Photocatalysis on Energy and Environment, Fujian Provincial Key Laboratory of Cancer Metastasis Chemoprevention and Chemotherapy, College of Chemistry, Fuzhou University, Fuzhou; 350002, China
  • [ 3 ] [Li, Chen-Qiao]Cancer Metastasis Alert and Prevention Center, Pharmaceutical Photocatalysis of State Key Laboratory of Photocatalysis on Energy and Environment, Fujian Provincial Key Laboratory of Cancer Metastasis Chemoprevention and Chemotherapy, College of Chemistry, Fuzhou University, Fuzhou; 350002, China
  • [ 4 ] [Lu, Zheng]Cancer Metastasis Alert and Prevention Center, Pharmaceutical Photocatalysis of State Key Laboratory of Photocatalysis on Energy and Environment, Fujian Provincial Key Laboratory of Cancer Metastasis Chemoprevention and Chemotherapy, College of Chemistry, Fuzhou University, Fuzhou; 350002, China
  • [ 5 ] [Liao, Xiao-Yun]Cancer Metastasis Alert and Prevention Center, Pharmaceutical Photocatalysis of State Key Laboratory of Photocatalysis on Energy and Environment, Fujian Provincial Key Laboratory of Cancer Metastasis Chemoprevention and Chemotherapy, College of Chemistry, Fuzhou University, Fuzhou; 350002, China
  • [ 6 ] [Huang, Jie]Cancer Metastasis Alert and Prevention Center, Pharmaceutical Photocatalysis of State Key Laboratory of Photocatalysis on Energy and Environment, Fujian Provincial Key Laboratory of Cancer Metastasis Chemoprevention and Chemotherapy, College of Chemistry, Fuzhou University, Fuzhou; 350002, China
  • [ 7 ] [Wu, Zai-Sheng]Cancer Metastasis Alert and Prevention Center, Pharmaceutical Photocatalysis of State Key Laboratory of Photocatalysis on Energy and Environment, Fujian Provincial Key Laboratory of Cancer Metastasis Chemoprevention and Chemotherapy, College of Chemistry, Fuzhou University, Fuzhou; 350002, China

Reprint 's Address:

  • [wu, zai-sheng]cancer metastasis alert and prevention center, pharmaceutical photocatalysis of state key laboratory of photocatalysis on energy and environment, fujian provincial key laboratory of cancer metastasis chemoprevention and chemotherapy, college of chemistry, fuzhou university, fuzhou; 350002, china

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Source :

Biosensors and Bioelectronics

ISSN: 0956-5663

Year: 2017

Volume: 90

Page: 314-320

8 . 1 7 3

JCR@2017

1 0 . 7 0 0

JCR@2023

ESI HC Threshold:226

JCR Journal Grade:1

CAS Journal Grade:1

Cited Count:

WoS CC Cited Count:

SCOPUS Cited Count: 49

ESI Highly Cited Papers on the List: 0 Unfold All

WanFang Cited Count:

Chinese Cited Count:

30 Days PV: 1

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