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author:

Liu, F. (Liu, F..) [1] | Zhang, H. (Zhang, H..) [2] | Lu, S. (Lu, S..) [3] | Wu, Z. (Wu, Z..) [4] | Zhou, L. (Zhou, L..) [5] | Cheng, Z. (Cheng, Z..) [6] | Bai, Y. (Bai, Y..) [7] | Zhao, J. (Zhao, J..) [8] | Zhang, Q. (Zhang, Q..) [9] | Mao, H. (Mao, H..) [10]

Indexed by:

Scopus

Abstract:

DNA methylation is closely associated with aberrant epigenetic changes. Previous studies have identified various genes associated with non-small cell lung cancer (NSCLC), but the precise combination responsible for its etiology is still debated. The aim of the present study was to select a new set of NSCLC-related genes using methylation-sensitive high-resolution melting. The promoter methylation status of six selected genes, consisting of protocadherin γ subfamily B, 6 (PCDHGB6), homeobox A9 (HOXA9), O6 -methylguanine-DNA methyltransferase (MGMT), microRNA (miR)-126, suppressor of cytokine signaling 3 (SOCS3) and Ras association domain family member 5, also termed NORE1A, was evaluated in 54 NSCLC patients. From these samples, genome-wide DNA was extracted and bisulfite conversion was performed along with fluorogenic quantitative polymerase chain reaction to detect methylation values of the six selected promoters. The present results revealed frequent methylation on PCDHGB6, HOXA9 and miR-126, which contrasted with infrequent methylation on MGMT. The results indicated no methylation on either SOCS3 or NORE1A. The sensitivity and specificity of the methylation assessment were 85.2 and 81.5%, respectively, and the analysis results were validated by pyrosequencing. Furthermore, minute comparison of the association between DNA methylation and clinical features was performed. Overall, these results may provide potential information for the development of better clinical diagnostics and more targeted and effective therapies for NSCLC. © 2018, Spandidos Publications. All rights reserved.

Keyword:

CpG; Diagnosis; High-resolution melting; Lung cancer; Methylation

Community:

  • [ 1 ] [Liu, F.]State Key Laboratory of Transducer Technology, Shanghai Institute of Microsystem and Information Technology, Chinese Academy of Science, Shanghai, 200050, China
  • [ 2 ] [Liu, F.]Institute of Biomedical and Pharmaceutical Technology, Fuzhou University, Fuzhou, Fujian 350002, China
  • [ 3 ] [Zhang, H.]State Key Laboratory of Transducer Technology, Shanghai Institute of Microsystem and Information Technology, Chinese Academy of Science, Shanghai, 200050, China
  • [ 4 ] [Lu, S.]Department of Pathology, Zhongshan Hospital, Fudan University, Shanghai, 200032, China
  • [ 5 ] [Wu, Z.]State Key Laboratory of Transducer Technology, Shanghai Institute of Microsystem and Information Technology, Chinese Academy of Science, Shanghai, 200050, China
  • [ 6 ] [Zhou, L.]State Key Laboratory of Transducer Technology, Shanghai Institute of Microsystem and Information Technology, Chinese Academy of Science, Shanghai, 200050, China
  • [ 7 ] [Cheng, Z.]State Key Laboratory of Transducer Technology, Shanghai Institute of Microsystem and Information Technology, Chinese Academy of Science, Shanghai, 200050, China
  • [ 8 ] [Bai, Y.]State Key Laboratory of Transducer Technology, Shanghai Institute of Microsystem and Information Technology, Chinese Academy of Science, Shanghai, 200050, China
  • [ 9 ] [Zhao, J.]Institute of Biomedical and Pharmaceutical Technology, Fuzhou University, Fuzhou, Fujian 350002, China
  • [ 10 ] [Zhang, Q.]Institute of Biomedical and Pharmaceutical Technology, Fuzhou University, Fuzhou, Fujian 350002, China
  • [ 11 ] [Zhang, Q.]Institute of Biomedical Engineering, Chinese Academy of Medical Science and Peking Union Medical College, The Key Laboratory of Biomaterials of Tianjin, Tianjin, 300192, China
  • [ 12 ] [Mao, H.]State Key Laboratory of Transducer Technology, Shanghai Institute of Microsystem and Information Technology, Chinese Academy of Science, Shanghai, 200050, China

Reprint 's Address:

  • [Zhang, Q.]Institute of Biomedical and Pharmaceutical Technology, Fuzhou University, 523 Gongye Road, China

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Source :

Oncology Letters

ISSN: 1792-1074

Year: 2018

Issue: 5

Volume: 15

Page: 7639-7648

1 . 8 7 1

JCR@2018

2 . 5 0 0

JCR@2023

ESI HC Threshold:182

JCR Journal Grade:4

CAS Journal Grade:4

Cited Count:

WoS CC Cited Count:

SCOPUS Cited Count: 21

ESI Highly Cited Papers on the List: 0 Unfold All

WanFang Cited Count:

Chinese Cited Count:

30 Days PV: 1

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