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author:

Li, H. (Li, H..) [1] | Wang, S. (Wang, S..) [2] | Wu, Z. (Wu, Z..) [3] | Xu, J. (Xu, J..) [4] | Shen, G. (Shen, G..) [5] | Yu, R. (Yu, R..) [6]

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Scopus

Abstract:

Enzymatic manipulation and modulation of nucleic acids are a central part of cellular function, protection, and reproduction, while rapid and accurate detection of ultralow amount of nucleic acids remains a major challenge in molecular biology research and clinic diagnosis of genetic diseases. Herein, we reported that exonuclease III can degrade the G-quadruplex structure, indicating the new exonuclease's function. Basing on the function of exonuclease III, a novel G-quadruplex-hemin DNAzyme-based colorimetric detection of tumor suppressor gene p53 was successfully developed. Although only one oligonucleotide probe was involved, the sensing strategy could suppress the optical background and achieve an efficient G-quadruplex-hemin DNAzyme-based signal amplification. Specifically, a label-free functional nucleic acid probe (called THzyme probe) was designed via introducing target DNA probe-contained hairpin structure into G-quadruplex DNAzyme. Even if this probe can fold into G-quadruplex structure in the presence of hemin very different from the double-stranded DNA, it is easily degraded by exonuclease III. Thus, no change in UV-vis absorption intensity is detected in the absence of target DNA. However, the hybridization of target DNA can protect the integrity and catalytic activity of THzyme probe, producing the DNAzyme-amplified colorimetric signal. As a result, the p53 gene was able to be detected down to 1.0. pM (final concentration in the signal-generating solution: 50.0. fM) and mismatched target DNAs were easily distinguished. It is expected that this simple sensing methodology for DNA detection can find its utility in point-of-care applications. © 2015 Elsevier B.V.

Keyword:

Colorimetric detection; Label-free; Multifunctional probe; New function of exonuclease; P53 gene

Community:

  • [ 1 ] [Li, H.]College of Chemistry and Chemical Engineering, Jiangxi Normal University, Nanchang, 330022, China
  • [ 2 ] [Li, H.]State Key Laboratory for Chemo/Biosensing and Chemometrics, College of Chemistry and Chemical Engineering, Hunan University, Changsha, 410082, China
  • [ 3 ] [Wang, S.]College of Chemistry and Chemical Engineering, Jiangxi Normal University, Nanchang, 330022, China
  • [ 4 ] [Wu, Z.]State Key Laboratory for Chemo/Biosensing and Chemometrics, College of Chemistry and Chemical Engineering, Hunan University, Changsha, 410082, China
  • [ 5 ] [Wu, Z.]Cancer Metastasis Alert and Prevention Center and Pharmaceutical Photocatalysis of State, Key Laboratory of Photocatalysis on Energy and Environment, College of Chemistry, Fuzhou University, Fuzhou, 350002, China
  • [ 6 ] [Xu, J.]Cancer Metastasis Alert and Prevention Center and Pharmaceutical Photocatalysis of State, Key Laboratory of Photocatalysis on Energy and Environment, College of Chemistry, Fuzhou University, Fuzhou, 350002, China
  • [ 7 ] [Shen, G.]State Key Laboratory for Chemo/Biosensing and Chemometrics, College of Chemistry and Chemical Engineering, Hunan University, Changsha, 410082, China
  • [ 8 ] [Yu, R.]State Key Laboratory for Chemo/Biosensing and Chemometrics, College of Chemistry and Chemical Engineering, Hunan University, Changsha, 410082, China

Reprint 's Address:

  • [Li, H.]State Key Laboratory for Chemo/Biosensing and Chemometrics, College of Chemistry and Chemical Engineering, Hunan UniversityChina

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Source :

Biosensors and Bioelectronics

ISSN: 0956-5663

Year: 2016

Volume: 77

Page: 879-885

7 . 7 8

JCR@2016

1 0 . 7 0 0

JCR@2023

ESI HC Threshold:235

JCR Journal Grade:1

CAS Journal Grade:1

Cited Count:

WoS CC Cited Count:

SCOPUS Cited Count:

ESI Highly Cited Papers on the List: 0 Unfold All

WanFang Cited Count:

Chinese Cited Count:

30 Days PV: 4

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