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author:

Chen, T. (Chen, T..) [1] | Zhou, M. (Zhou, M..) [2] | Chen, W. (Chen, W..) [3] | Lorimer, J. (Lorimer, J..) [4] | Rao, P. (Rao, P..) [5] | Walker, B. (Walker, B..) [6] | Shaw, C. (Shaw, C..) [7]

Indexed by:

Scopus

Abstract:

The defensive skin secretions of amphibians are a rich source of bioactive peptides. Here we describe a rapid technique for skin granular gland transcriptome cloning from a surrogate tissue-the secretion itself. cDNA libraries were constructed from lyophilized skin secretion from each of the Chinese frogs (Rana schmackeri, Rana versabilis, and Rana plancyi fukienensis) using magnetic oligo(dT) bead-captured polyadenylated mRNA as templates. Specific esculentin cDNAs were amplified by 3′-RACE using a degenerate primer designed for a consensus nucleotide sequence in the 5′ untranslated region of previously characterized ranid frog peptide cDNAs. The cloned cDNAs were found to encode the antimicrobial peptides esculentins 1 and 2 from each of the species examined. The presence of predicted peptide structures in skin secretions was confirmed by MALDI-TOF mass spectrometry and automated Edman degradation. This experimental approach can thus rapidly expedite parallel transcriptome and peptidome analysis of amphibian granular gland secretions without harming or sacrificing donor animals. © 2005 Elsevier Inc. All rights reserved.

Keyword:

Amphibian; Cloning; Mass spectrometry; Peptide; Skin secretion

Community:

  • [ 1 ] [Chen, T.]Institute of Biotechnology, Fuzhou University, Fuzhou, 350002 Fujian Province, China
  • [ 2 ] [Chen, T.]School of Pharmacy, Queen's University, 97 Lisburn Road, Belfast, BT9 7BL Northern Ireland, United Kingdom
  • [ 3 ] [Zhou, M.]School of Pharmacy, Queen's University, 97 Lisburn Road, Belfast, BT9 7BL Northern Ireland, United Kingdom
  • [ 4 ] [Chen, W.]School of Pharmacy, Queen's University, 97 Lisburn Road, Belfast, BT9 7BL Northern Ireland, United Kingdom
  • [ 5 ] [Lorimer, J.]School of Pharmacy, Queen's University, 97 Lisburn Road, Belfast, BT9 7BL Northern Ireland, United Kingdom
  • [ 6 ] [Rao, P.]Institute of Biotechnology, Fuzhou University, Fuzhou, 350002 Fujian Province, China
  • [ 7 ] [Walker, B.]School of Pharmacy, Queen's University, 97 Lisburn Road, Belfast, BT9 7BL Northern Ireland, United Kingdom
  • [ 8 ] [Shaw, C.]School of Pharmacy, Queen's University, 97 Lisburn Road, Belfast, BT9 7BL Northern Ireland, United Kingdom

Reprint 's Address:

  • [Walker, B.]School of Pharmacy, Queen's University, 97 Lisburn Road, Belfast, BT9 7BL Northern Ireland, United Kingdom

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Source :

Genomics

ISSN: 0888-7543

Year: 2006

Issue: 5

Volume: 87

Page: 638-644

3 . 5 5 8

JCR@2006

3 . 4 0 0

JCR@2023

JCR Journal Grade:1

Cited Count:

WoS CC Cited Count:

SCOPUS Cited Count: 18

ESI Highly Cited Papers on the List: 0 Unfold All

WanFang Cited Count:

Chinese Cited Count:

30 Days PV: 0

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