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author:

Dai, Junduan (Dai, Junduan.) [1] | Xing, Chao (Xing, Chao.) [2] | Lin, Yuhong (Lin, Yuhong.) [3] | Huang, Yuqing (Huang, Yuqing.) [4] | Yang, Yuling (Yang, Yuling.) [5] | Chen, Zhaowei (Chen, Zhaowei.) [6] | Lu, Chunhua (Lu, Chunhua.) [7] | Yang, Huanghao (Yang, Huanghao.) [8]

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Abstract:

Dynamic DNA self-assembly (DDSA) has been developed for highly sensitive monitoring intracellular cancer biomarkers via in situ signal amplification. However, each step of reaction depends on the diffusion of DNA strands within the three-dimensional cellular environment, which greatly limits the reaction efficiency. Herein, we proposed a localized catalytic hairpin assembly (CHA) reaction on DNA Origami with the purpose of detection and imaging of intracellular microRNA-21. In this strategy, 8 pairs of DNA hairpins of CHA reaction alternately hybridized to the protruding single strands of DNA origami rectangle, so that the whole reaction process is constrained in a compact space and independent on the diffusion of the DNA strands. Obviously, this localized CHA reaction offered faster reaction kinetics. Our results confirmed that, compared to the traditional CHA reaction, constraining DNA hairpins onto a rectangular DNA origami increased the reaction rate and the sensitivity. In addition, DNA origami rectangle could also play as a carrier to deliver DNA hairpins to the cytoplasm and protect DNA hairpins from the attack of nuclease. This strategy provided a versatile platform which could be easily integrated with reported DDSA-based strategy and therefore showing a wide application prospect. © 2021

Keyword:

Cytology DNA Reaction kinetics RNA

Community:

  • [ 1 ] [Dai, Junduan]MOE Key Laboratory for Analytical Science of Food Safety and Biology, Fujian Provincial Key Laboratory of Analysis and Detection Technology for Food Safety, State Key Laboratory of Photocatalysis on Energy and Environment, College of Chemistry, Fuzhou University, Fuzhou; 350116, China
  • [ 2 ] [Xing, Chao]Fujian Key Laboratory of Functional Marine Sensing Materials, Center for Advanced Marine Materials and Smart Sensors, Minjiang University, Fuzhou; 350108, China
  • [ 3 ] [Lin, Yuhong]MOE Key Laboratory for Analytical Science of Food Safety and Biology, Fujian Provincial Key Laboratory of Analysis and Detection Technology for Food Safety, State Key Laboratory of Photocatalysis on Energy and Environment, College of Chemistry, Fuzhou University, Fuzhou; 350116, China
  • [ 4 ] [Huang, Yuqing]MOE Key Laboratory for Analytical Science of Food Safety and Biology, Fujian Provincial Key Laboratory of Analysis and Detection Technology for Food Safety, State Key Laboratory of Photocatalysis on Energy and Environment, College of Chemistry, Fuzhou University, Fuzhou; 350116, China
  • [ 5 ] [Yang, Yuling]MOE Key Laboratory for Analytical Science of Food Safety and Biology, Fujian Provincial Key Laboratory of Analysis and Detection Technology for Food Safety, State Key Laboratory of Photocatalysis on Energy and Environment, College of Chemistry, Fuzhou University, Fuzhou; 350116, China
  • [ 6 ] [Chen, Zhaowei]MOE Key Laboratory for Analytical Science of Food Safety and Biology, Fujian Provincial Key Laboratory of Analysis and Detection Technology for Food Safety, State Key Laboratory of Photocatalysis on Energy and Environment, College of Chemistry, Fuzhou University, Fuzhou; 350116, China
  • [ 7 ] [Lu, Chunhua]MOE Key Laboratory for Analytical Science of Food Safety and Biology, Fujian Provincial Key Laboratory of Analysis and Detection Technology for Food Safety, State Key Laboratory of Photocatalysis on Energy and Environment, College of Chemistry, Fuzhou University, Fuzhou; 350116, China
  • [ 8 ] [Yang, Huanghao]MOE Key Laboratory for Analytical Science of Food Safety and Biology, Fujian Provincial Key Laboratory of Analysis and Detection Technology for Food Safety, State Key Laboratory of Photocatalysis on Energy and Environment, College of Chemistry, Fuzhou University, Fuzhou; 350116, China

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Source :

Sensors and Actuators, B: Chemical

ISSN: 0925-4005

Year: 2021

Volume: 344

6 . 3 9 3

JCR@2018

CAS Journal Grade:1

Cited Count:

WoS CC Cited Count: 0

SCOPUS Cited Count: 20

ESI Highly Cited Papers on the List: 0 Unfold All

WanFang Cited Count:

Chinese Cited Count:

30 Days PV: 0

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