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author:

Wang, T. (Wang, T..) [1] | Lan, J. (Lan, J..) [2] | Han, Z. (Han, Z..) [3] | Hu, Z. (Hu, Z..) [4] | Huang, Y. (Huang, Y..) [5] | Deng, Y. (Deng, Y..) [6] | Zhang, H. (Zhang, H..) [7] | Wang, J. (Wang, J..) [8] | Chen, M. (Chen, M..) [9] | Jiang, H. (Jiang, H..) [10] | Lee, R.-G. (Lee, R.-G..) [11] | Gao, Q. (Gao, Q..) [12] | Du, M. (Du, M..) [13] | Tong, T. (Tong, T..) [14] | Chen, G. (Chen, G..) [15]

Indexed by:

Scopus

Abstract:

The application of deep learning in the medical field has continuously made huge breakthroughs in recent years. Based on convolutional neural network (CNN), the U-Net framework has become the benchmark of the medical image segmentation task. However, this framework cannot fully learn global information and remote semantic information. The transformer structure has been demonstrated to capture global information relatively better than the U-Net, but the ability to learn local information is not as good as CNN. Therefore, we propose a novel network referred to as the O-Net, which combines the advantages of CNN and transformer to fully use both the global and the local information for improving medical image segmentation and classification. In the encoder part of our proposed O-Net framework, we combine the CNN and the Swin Transformer to acquire both global and local contextual features. In the decoder part, the results of the Swin Transformer and the CNN blocks are fused to get the final results. We have evaluated the proposed network on the synapse multi-organ CT dataset and the ISIC 2017 challenge dataset for the segmentation task. The classification network is simultaneously trained by using the encoder weights of the segmentation network. The experimental results show that our proposed O-Net achieves superior segmentation performance than state-of-the-art approaches, and the segmentation results are beneficial for improving the accuracy of the classification task. The codes and models of this study are available at https://github.com/ortonwang/O-Net. Copyright © 2022 Wang, Lan, Han, Hu, Huang, Deng, Zhang, Wang, Chen, Jiang, Lee, Gao, Du, Tong and Chen.

Keyword:

classification; CNN; deep learning; medical image segmentation; transformer

Community:

  • [ 1 ] [Wang, T.]College of Physics and Information Engineering, Fuzhou University, Fuzhou, China
  • [ 2 ] [Wang, T.]Fujian Key Lab of Medical Instrumentation and Pharmaceutical Technology, Fuzhou University, Fuzhou, China
  • [ 3 ] [Lan, J.]College of Physics and Information Engineering, Fuzhou University, Fuzhou, China
  • [ 4 ] [Lan, J.]Fujian Key Lab of Medical Instrumentation and Pharmaceutical Technology, Fuzhou University, Fuzhou, China
  • [ 5 ] [Han, Z.]College of Physics and Information Engineering, Fuzhou University, Fuzhou, China
  • [ 6 ] [Han, Z.]Fujian Key Lab of Medical Instrumentation and Pharmaceutical Technology, Fuzhou University, Fuzhou, China
  • [ 7 ] [Hu, Z.]College of Physics and Information Engineering, Fuzhou University, Fuzhou, China
  • [ 8 ] [Hu, Z.]Fujian Key Lab of Medical Instrumentation and Pharmaceutical Technology, Fuzhou University, Fuzhou, China
  • [ 9 ] [Huang, Y.]College of Physics and Information Engineering, Fuzhou University, Fuzhou, China
  • [ 10 ] [Huang, Y.]Fujian Key Lab of Medical Instrumentation and Pharmaceutical Technology, Fuzhou University, Fuzhou, China
  • [ 11 ] [Deng, Y.]College of Physics and Information Engineering, Fuzhou University, Fuzhou, China
  • [ 12 ] [Deng, Y.]Fujian Key Lab of Medical Instrumentation and Pharmaceutical Technology, Fuzhou University, Fuzhou, China
  • [ 13 ] [Zhang, H.]Department of Pathology, Fujian Cancer Hospital, Fujian Medical University, Fuzhou, China
  • [ 14 ] [Wang, J.]Department of Pathology, Fujian Cancer Hospital, Fujian Medical University, Fuzhou, China
  • [ 15 ] [Chen, M.]Department of Pathology, Fujian Cancer Hospital, Fujian Medical University, Fuzhou, China
  • [ 16 ] [Jiang, H.]Fujian Key Lab of Medical Instrumentation and Pharmaceutical Technology, Fuzhou University, Fuzhou, China
  • [ 17 ] [Jiang, H.]College of Electrical Engineering and Automation, Fuzhou University, Fuzhou, China
  • [ 18 ] [Lee, R.-G.]Department of Electronic Engineering, National Taipei University of Technology, Taipei, Taiwan
  • [ 19 ] [Gao, Q.]College of Physics and Information Engineering, Fuzhou University, Fuzhou, China
  • [ 20 ] [Gao, Q.]Fujian Key Lab of Medical Instrumentation and Pharmaceutical Technology, Fuzhou University, Fuzhou, China
  • [ 21 ] [Gao, Q.]Imperial Vision Technology, Fuzhou, China
  • [ 22 ] [Du, M.]College of Physics and Information Engineering, Fuzhou University, Fuzhou, China
  • [ 23 ] [Tong, T.]College of Physics and Information Engineering, Fuzhou University, Fuzhou, China
  • [ 24 ] [Tong, T.]Fujian Key Lab of Medical Instrumentation and Pharmaceutical Technology, Fuzhou University, Fuzhou, China
  • [ 25 ] [Tong, T.]Imperial Vision Technology, Fuzhou, China
  • [ 26 ] [Chen, G.]Department of Pathology, Fujian Cancer Hospital, Fujian Medical University, Fuzhou, China
  • [ 27 ] [Chen, G.]Fujian Provincial Key Laboratory of Translational Cancer Medicin, Fuzhou, China

Reprint 's Address:

  • [Tong, T.]College of Physics and Information Engineering, China; ; Department of Pathology, China; 电子邮件: naichengang@126.com

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Source :

Frontiers in Neuroscience

ISSN: 1662-4548

Year: 2022

Volume: 16

4 . 3

JCR@2022

3 . 2 0 0

JCR@2023

ESI HC Threshold:52

JCR Journal Grade:2

CAS Journal Grade:3

Cited Count:

WoS CC Cited Count:

SCOPUS Cited Count:

ESI Highly Cited Papers on the List: 0 Unfold All

WanFang Cited Count:

Chinese Cited Count:

30 Days PV: 2

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