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author:

Wang, Qing (Wang, Qing.) [1] | Yu, Yushuai (Yu, Yushuai.) [2] | Ruan, Liqiong (Ruan, Liqiong.) [3] | Huang, Mingyao (Huang, Mingyao.) [4] | Chen, Wei (Chen, Wei.) [5] | Sun, Xiaomei (Sun, Xiaomei.) [6] | Liu, Jun (Liu, Jun.) [7] | Jiang, Zirong (Jiang, Zirong.) [8]

Indexed by:

SCIE

Abstract:

BackgroundTumor-associated macrophages (TAMs) are pivotal components of the breast cancer (BC) tumor microenvironment (TME), significantly influencing tumor progression and response to therapy. However, the heterogeneity and specific roles of TAM subpopulations in BC remain inadequately understood.MethodsWe performed an integrated analysis of single-cell RNA sequencing (scRNA-seq) and bulk RNA sequencing (RNA-seq) data from BC patients to comprehensively characterize TAM heterogeneity. Utilizing the MetaTiME computational framework and consensus clustering, we identified distinct TAM subtypes and assessed their associations with clinical outcomes and treatment responses. A machine learning-based predictive model was developed to evaluate the prognostic significance of TAM-related gene expression profiles.ResultsOur analysis revealed three distinct TAM subgroups. Notably, we identified a novel macrophage subtype, M_Macrophage-SPP1-C1Q, characterized by high expression of SPP1 and C1QA, representing an intermediate differentiation state with unique proliferative and oncogenic properties. High infiltration of M_Macrophage-SPP1-C1Q was significantly associated with poor overall survival (OS) and chemotherapy resistance in BC patients. We developed a Random Forest (RF)-based predictive model, Macro.RF, which accurately stratified patients based on survival outcomes and chemotherapy responses, independent of established prognostic parameters.ConclusionThis study uncovers a previously unrecognized TAM subtype that drives poor prognosis in BC. The identification of M_Macrophage-SPP1-C1Q enhances our understanding of TAM heterogeneity within the TME and offers a novel prognostic biomarker. The Macro.RF model provides a robust tool for predicting clinical outcomes and guiding personalized treatment strategies in BC patients.

Keyword:

Large-scale data analysis Macrophages Prognosis Tumor microenvironment

Community:

  • [ 1 ] [Liu, Jun]Ningde Normal Univ, Ningde Municipal Hosp, Dept Thyroid & Breast Surg, Ningde 352100, Peoples R China
  • [ 2 ] [Jiang, Zirong]Ningde Normal Univ, Ningde Municipal Hosp, Dept Thyroid & Breast Surg, Ningde 352100, Peoples R China
  • [ 3 ] [Jiang, Zirong]Fujian Med Univ, Ningde Clin Med Coll, Ningde 352100, Peoples R China
  • [ 4 ] [Wang, Qing]Fujian Med Univ, Fuzhou 350011, Peoples R China
  • [ 5 ] [Yu, Yushuai]Fujian Med Univ, Fuzhou 350011, Peoples R China
  • [ 6 ] [Huang, Mingyao]Fujian Med Univ, Fuzhou 350011, Peoples R China
  • [ 7 ] [Ruan, Liqiong]Ningde Normal Univ, Ningde Municipal Hosp, Dept Clin Lab, Ningde 352100, Peoples R China
  • [ 8 ] [Chen, Wei]Fujian Med Univ, Affiliated Prov Hosp, Fujian Prov Hosp, Dept Breast Surg,Shengli Clin Med Coll,Fuzhou Univ, Fuzhou 350001, Peoples R China
  • [ 9 ] [Sun, Xiaomei]Ningde Normal Univ, Ningde Municipal Hosp, Dept Pathol, Ningde 352100, Peoples R China
  • [ 10 ] [Liu, Jun]Shanghai Gen Hosp, Dept Breast Thyroid Surg, Shanghai 200000, Peoples R China

Reprint 's Address:

  • [Liu, Jun]Ningde Normal Univ, Ningde Municipal Hosp, Dept Thyroid & Breast Surg, Ningde 352100, Peoples R China;;[Jiang, Zirong]Ningde Normal Univ, Ningde Municipal Hosp, Dept Thyroid & Breast Surg, Ningde 352100, Peoples R China;;[Jiang, Zirong]Fujian Med Univ, Ningde Clin Med Coll, Ningde 352100, Peoples R China;;[Liu, Jun]Shanghai Gen Hosp, Dept Breast Thyroid Surg, Shanghai 200000, Peoples R China

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Source :

CANCER CELL INTERNATIONAL

Year: 2025

Issue: 1

Volume: 25

5 . 3 0 0

JCR@2023

Cited Count:

WoS CC Cited Count:

SCOPUS Cited Count:

ESI Highly Cited Papers on the List: 0 Unfold All

WanFang Cited Count:

Chinese Cited Count:

30 Days PV: 0

Online/Total:192/10053052
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