• Complex
  • Title
  • Keyword
  • Abstract
  • Scholars
  • Journal
  • ISSN
  • Conference
成果搜索

author:

Wang, Xiaofeng (Wang, Xiaofeng.) [1] | Yan, Renxiang (Yan, Renxiang.) [2] (Scholars:鄢仁祥)

Indexed by:

Scopus SCIE

Abstract:

Due to rising development costs and stagnant product outputs of traditional drug discovery methods, drug repositioning, which discovers new indications for existing drugs, has attracted increasing interest. Computational drug repositioning can integrate prioritization information and accelerate time lines even further. However, most existing methods for predicting drug repositioning have low precisions. The present article proposed a new method named DDAPRED () for drug repositioning prediction. The method integrated multiple sources of drug similarity and disease similarity information, and it used the regularized logistic matrix decomposition method to significantly improve the prediction performance. In 5-fold cross-validation, the areas under the receiver operating characteristic curve (AUROC) and the precision-recall curve (AUPRC) of DDAPRED reached 0.932 and 0.438, respectively, exceeding other methods. The present study also analyzed the parameters influencing the model performance and the effect of different drug similarity information in-depth, and it verified the treatment relationship of the top 50 predictions with unknown relationships in the training set, further demonstrating the practicability of our method.

Keyword:

Drug-disease association Drug repositioning Logistic matrix factorization Prediction

Community:

  • [ 1 ] [Wang, Xiaofeng]Shanxi Normal Univ, Coll Math & Comp Sci, Linfen 041004, Shanxi, Peoples R China
  • [ 2 ] [Yan, Renxiang]Fuzhou Univ, Coll Biol Sci & Engn, Fuzhou 350106, Fujian, Peoples R China
  • [ 3 ] [Yan, Renxiang]Fujian Key Lab Marine Enzyme Engn, Fuzhou 350116, Fujian, Peoples R China

Reprint 's Address:

  • 鄢仁祥

    [Yan, Renxiang]Fuzhou Univ, Coll Biol Sci & Engn, Fuzhou 350106, Fujian, Peoples R China;;[Yan, Renxiang]Fujian Key Lab Marine Enzyme Engn, Fuzhou 350116, Fujian, Peoples R China

Show more details

Related Keywords:

Source :

JOURNAL OF MOLECULAR MODELING

ISSN: 1610-2940

Year: 2020

Issue: 3

Volume: 26

1 . 8 1

JCR@2020

2 . 1 0 0

JCR@2023

ESI Discipline: CHEMISTRY;

ESI HC Threshold:160

JCR Journal Grade:3

CAS Journal Grade:4

Cited Count:

WoS CC Cited Count:

SCOPUS Cited Count: 6

ESI Highly Cited Papers on the List: 0 Unfold All

WanFang Cited Count:

Chinese Cited Count:

30 Days PV: 0

Online/Total:422/11282663
Address:FZU Library(No.2 Xuyuan Road, Fuzhou, Fujian, PRC Post Code:350116) Contact Us:0591-22865326
Copyright:FZU Library Technical Support:Beijing Aegean Software Co., Ltd. 闽ICP备05005463号-1