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author:

Xu, Huo (Xu, Huo.) [1] | Zhang, Rongbo (Zhang, Rongbo.) [2] | Li, Feng (Li, Feng.) [3] | Zhou, Yingying (Zhou, Yingying.) [4] | Peng, Ting (Peng, Ting.) [5] | Wang, Xuedong (Wang, Xuedong.) [6] | Shen, Zhifa (Shen, Zhifa.) [7]

Indexed by:

EI Scopus SCIE

Abstract:

A powerful double-hairpin molecular beacon (DHMB) was developed for cancer-related KRAS gene detection based on the one-to-two stoichiometry. During target DNA detection, DHMB can execute signal transduction even if no any exogenous element is involved. Unlike the conventional molecular beacon based on the one-to-one interaction, one target DNA not only hybridizes with one DHMB and opens its hairpin but also promotes the interaction between two DHMBs, causing the separation of two fluorophores from quenchers. This leads to an enhanced fluorescence signal. As a result, the target KRAS gene is able to be detected within a wide dynamic range from 0.05 to 200 nM with the detection limit of 50 pM, indicating a dramatic improvement compared with traditional molecular beacons. Moreover, the point mutations existing in target DNAs can be easily screened. The potential application for target species in real samples was indicated by the analysis of PCR amplicons of DNAs from the DNA extracted from SW620 cell. Besides becoming a promising candidate probe for molecular biology research and clinical diagnosis of genetic diseases, the DHMB is expected to provide a significant insight into the design of DNA probe-based homogenous sensing systems.

Keyword:

Double-hairpin molecular beacon (DHMB) KRAS gene One-to-two stoichiometry

Community:

  • [ 1 ] [Xu, Huo]Wenzhou Med Univ, Key Lab Watershed Sci & Hlth Zhejiang Prov, Inst Funct Nucle Acids & Personalized Canc Theran, Key Lab Lab Med,Minist Educ China, Wenzhou 325035, Peoples R China
  • [ 2 ] [Zhang, Rongbo]Wenzhou Med Univ, Key Lab Watershed Sci & Hlth Zhejiang Prov, Inst Funct Nucle Acids & Personalized Canc Theran, Key Lab Lab Med,Minist Educ China, Wenzhou 325035, Peoples R China
  • [ 3 ] [Li, Feng]Wenzhou Med Univ, Key Lab Watershed Sci & Hlth Zhejiang Prov, Inst Funct Nucle Acids & Personalized Canc Theran, Key Lab Lab Med,Minist Educ China, Wenzhou 325035, Peoples R China
  • [ 4 ] [Zhou, Yingying]Wenzhou Med Univ, Key Lab Watershed Sci & Hlth Zhejiang Prov, Inst Funct Nucle Acids & Personalized Canc Theran, Key Lab Lab Med,Minist Educ China, Wenzhou 325035, Peoples R China
  • [ 5 ] [Peng, Ting]Wenzhou Med Univ, Key Lab Watershed Sci & Hlth Zhejiang Prov, Inst Funct Nucle Acids & Personalized Canc Theran, Key Lab Lab Med,Minist Educ China, Wenzhou 325035, Peoples R China
  • [ 6 ] [Wang, Xuedong]Wenzhou Med Univ, Key Lab Watershed Sci & Hlth Zhejiang Prov, Inst Funct Nucle Acids & Personalized Canc Theran, Key Lab Lab Med,Minist Educ China, Wenzhou 325035, Peoples R China
  • [ 7 ] [Shen, Zhifa]Wenzhou Med Univ, Key Lab Watershed Sci & Hlth Zhejiang Prov, Inst Funct Nucle Acids & Personalized Canc Theran, Key Lab Lab Med,Minist Educ China, Wenzhou 325035, Peoples R China
  • [ 8 ] [Xu, Huo]Wenzhou Med Univ, Sch Lab Med & Life Sci, Zhejiang Prov Key Lab Med Genet, Wenzhou 325035, Peoples R China
  • [ 9 ] [Zhang, Rongbo]Wenzhou Med Univ, Sch Lab Med & Life Sci, Zhejiang Prov Key Lab Med Genet, Wenzhou 325035, Peoples R China
  • [ 10 ] [Li, Feng]Wenzhou Med Univ, Sch Lab Med & Life Sci, Zhejiang Prov Key Lab Med Genet, Wenzhou 325035, Peoples R China
  • [ 11 ] [Zhou, Yingying]Wenzhou Med Univ, Sch Lab Med & Life Sci, Zhejiang Prov Key Lab Med Genet, Wenzhou 325035, Peoples R China
  • [ 12 ] [Peng, Ting]Wenzhou Med Univ, Sch Lab Med & Life Sci, Zhejiang Prov Key Lab Med Genet, Wenzhou 325035, Peoples R China
  • [ 13 ] [Wang, Xuedong]Wenzhou Med Univ, Sch Lab Med & Life Sci, Zhejiang Prov Key Lab Med Genet, Wenzhou 325035, Peoples R China
  • [ 14 ] [Shen, Zhifa]Wenzhou Med Univ, Sch Lab Med & Life Sci, Zhejiang Prov Key Lab Med Genet, Wenzhou 325035, Peoples R China
  • [ 15 ] [Xu, Huo]Fuzhou Univ, Canc Metastasis Alert & Prevent Ctr, State Key Lab Photocatalysis Energy & Environm, Pharmaceut Photocatalysis, Fuzhou 350002, Peoples R China
  • [ 16 ] [Xu, Huo]Fuzhou Univ, Coll Chem, Fujian Prov Key Lab Canc Metastasis Chemoprevent, Fuzhou 350002, Peoples R China

Reprint 's Address:

  • [Wang, Xuedong]Wenzhou Med Univ, Key Lab Watershed Sci & Hlth Zhejiang Prov, Inst Funct Nucle Acids & Personalized Canc Theran, Key Lab Lab Med,Minist Educ China, Wenzhou 325035, Peoples R China;;[Shen, Zhifa]Wenzhou Med Univ, Key Lab Watershed Sci & Hlth Zhejiang Prov, Inst Funct Nucle Acids & Personalized Canc Theran, Key Lab Lab Med,Minist Educ China, Wenzhou 325035, Peoples R China;;[Wang, Xuedong]Wenzhou Med Univ, Sch Lab Med & Life Sci, Zhejiang Prov Key Lab Med Genet, Wenzhou 325035, Peoples R China;;[Shen, Zhifa]Wenzhou Med Univ, Sch Lab Med & Life Sci, Zhejiang Prov Key Lab Med Genet, Wenzhou 325035, Peoples R China

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Source :

ANALYTICAL AND BIOANALYTICAL CHEMISTRY

ISSN: 1618-2642

Year: 2016

Issue: 22

Volume: 408

Page: 6181-6188

3 . 4 3 1

JCR@2016

3 . 8 0 0

JCR@2023

ESI Discipline: CHEMISTRY;

ESI HC Threshold:235

JCR Journal Grade:1

CAS Journal Grade:2

Cited Count:

WoS CC Cited Count: 11

SCOPUS Cited Count: 12

ESI Highly Cited Papers on the List: 0 Unfold All

WanFang Cited Count:

Chinese Cited Count:

30 Days PV: 0

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