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author:

Xu, Huo (Xu, Huo.) [1] | Wu, Dong (Wu, Dong.) [2] | Jiang, Yifan (Jiang, Yifan.) [3] | Zhang, Rongbo (Zhang, Rongbo.) [4] | Wu, Qingzheng (Wu, Qingzheng.) [5] | Liu, Yiyun (Liu, Yiyun.) [6] | Li, Feng (Li, Feng.) [7] (Scholars:李锋) | Wu, Zai-Sheng (Wu, Zai-Sheng.) [8] (Scholars:吴再生)

Indexed by:

EI Scopus SCIE

Abstract:

Mutations in Kras gene may be used as a diagnostic marker and a target for treatment of the broad spectrum of human cancers. In this study, we developed a new class of amplification assay, double-hairpin molecular beacon (DHMB)-based cascade rolling circle amplification (RCA), for ultrasensitive and selective detection of Kras gene in a homogenous solution. Specifically, target DNA can hybridize with DHMB and activate cyclical target strand displacement polymerization (CTDP) and nicking-mediated strand-displacement polymerization (NMDP). The resulting nicked/displaced fragments substantially outnumber target DNA and cause the cascade rolling circle amplification (C-RCA) and nicked fragment-induced strand-displacement polymerization (NFDP). Even if four amplification processes are designed, only DHMB, padlock probe and polymerization primer are involved. Under optimized conditions, this screening system exhibits a linear range of 5 orders of magnitude (from 100 fM to 20 nM), and the detection limit is down to 16 fM. Moreover, the developed biosensing system offers a high assay specificity for perfectly matched target DNA, and the measured data from practical samples demonstrated the potential application in the cancer diagnoses. As a proof-of-concept genetic assay, the novel signaling strategy, as well as desirable analytical capability, would significantly benefit the development of versatile amplification gene profiling platforms, revealing great promise in biological studies and medical diagnostics.

Keyword:

Cascade-rolling circle amplification Double-hairpin molecular beacon (DHMB) Kras gene

Community:

  • [ 1 ] [Xu, Huo]Fuzhou Univ, Canc Metastasis Alert & Prevent Ctr, Pharmaceut Photocatalysis State Key Lab Photocata, Coll Chem, Fuzhou 350002, Peoples R China
  • [ 2 ] [Wu, Dong]Fuzhou Univ, Canc Metastasis Alert & Prevent Ctr, Pharmaceut Photocatalysis State Key Lab Photocata, Coll Chem, Fuzhou 350002, Peoples R China
  • [ 3 ] [Jiang, Yifan]Fuzhou Univ, Canc Metastasis Alert & Prevent Ctr, Pharmaceut Photocatalysis State Key Lab Photocata, Coll Chem, Fuzhou 350002, Peoples R China
  • [ 4 ] [Zhang, Rongbo]Fuzhou Univ, Canc Metastasis Alert & Prevent Ctr, Pharmaceut Photocatalysis State Key Lab Photocata, Coll Chem, Fuzhou 350002, Peoples R China
  • [ 5 ] [Wu, Qingzheng]Fuzhou Univ, Canc Metastasis Alert & Prevent Ctr, Pharmaceut Photocatalysis State Key Lab Photocata, Coll Chem, Fuzhou 350002, Peoples R China
  • [ 6 ] [Liu, Yiyun]Fuzhou Univ, Canc Metastasis Alert & Prevent Ctr, Pharmaceut Photocatalysis State Key Lab Photocata, Coll Chem, Fuzhou 350002, Peoples R China
  • [ 7 ] [Li, Feng]Fuzhou Univ, Canc Metastasis Alert & Prevent Ctr, Pharmaceut Photocatalysis State Key Lab Photocata, Coll Chem, Fuzhou 350002, Peoples R China
  • [ 8 ] [Wu, Zai-Sheng]Fuzhou Univ, Canc Metastasis Alert & Prevent Ctr, Pharmaceut Photocatalysis State Key Lab Photocata, Coll Chem, Fuzhou 350002, Peoples R China
  • [ 9 ] [Xu, Huo]Fuzhou Univ, Coll Chem, Fujian Prov Key Lab Canc Metastasis Chemoprevent, Fuzhou 350002, Peoples R China
  • [ 10 ] [Wu, Dong]Fuzhou Univ, Coll Chem, Fujian Prov Key Lab Canc Metastasis Chemoprevent, Fuzhou 350002, Peoples R China
  • [ 11 ] [Jiang, Yifan]Fuzhou Univ, Coll Chem, Fujian Prov Key Lab Canc Metastasis Chemoprevent, Fuzhou 350002, Peoples R China
  • [ 12 ] [Zhang, Rongbo]Fuzhou Univ, Coll Chem, Fujian Prov Key Lab Canc Metastasis Chemoprevent, Fuzhou 350002, Peoples R China
  • [ 13 ] [Wu, Qingzheng]Fuzhou Univ, Coll Chem, Fujian Prov Key Lab Canc Metastasis Chemoprevent, Fuzhou 350002, Peoples R China
  • [ 14 ] [Liu, Yiyun]Fuzhou Univ, Coll Chem, Fujian Prov Key Lab Canc Metastasis Chemoprevent, Fuzhou 350002, Peoples R China
  • [ 15 ] [Li, Feng]Fuzhou Univ, Coll Chem, Fujian Prov Key Lab Canc Metastasis Chemoprevent, Fuzhou 350002, Peoples R China
  • [ 16 ] [Wu, Zai-Sheng]Fuzhou Univ, Coll Chem, Fujian Prov Key Lab Canc Metastasis Chemoprevent, Fuzhou 350002, Peoples R China
  • [ 17 ] [Zhang, Rongbo]Wenzhou Med Univ, Key Lab Watershed Sci & Hlth Zhejiang Prov, Inst Funct Nucle Acids & Personalized Canc Theran, Minist Educ China,Key Lab Lab Med, Wenzhou 325035, Peoples R China
  • [ 18 ] [Li, Feng]Wenzhou Med Univ, Key Lab Watershed Sci & Hlth Zhejiang Prov, Inst Funct Nucle Acids & Personalized Canc Theran, Minist Educ China,Key Lab Lab Med, Wenzhou 325035, Peoples R China
  • [ 19 ] [Zhang, Rongbo]Wenzhou Med Univ, Sch Lab Med & Life Sci, Zhejiang Prov Key Lab Med Genet, Wenzhou 325035, Peoples R China
  • [ 20 ] [Li, Feng]Wenzhou Med Univ, Sch Lab Med & Life Sci, Zhejiang Prov Key Lab Med Genet, Wenzhou 325035, Peoples R China

Reprint 's Address:

  • 吴再生

    [Wu, Zai-Sheng]Fuzhou Univ, CMAPC, Fuzhou 350002, Fujian, Peoples R China

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Related Keywords:

Source :

TALANTA

ISSN: 0039-9140

Year: 2017

Volume: 164

Page: 511-517

4 . 2 4 4

JCR@2017

5 . 6 0 0

JCR@2023

ESI Discipline: CHEMISTRY;

ESI HC Threshold:226

JCR Journal Grade:1

CAS Journal Grade:2

Cited Count:

WoS CC Cited Count: 17

SCOPUS Cited Count: 17

ESI Highly Cited Papers on the List: 0 Unfold All

WanFang Cited Count:

Chinese Cited Count:

30 Days PV: 2

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