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author:

Wang, Liu (Wang, Liu.) [1] | He, Fang (He, Fang.) [2] | Chen, Xueyun (Chen, Xueyun.) [3] | He, Kaiyu (He, Kaiyu.) [4] | Bai, Linlin (Bai, Linlin.) [5] | Wang, Qiang (Wang, Qiang.) [6] | Zhang, Fang (Zhang, Fang.) [7] | Xu, Xiahong (Xu, Xiahong.) [8]

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EI

Abstract:

CRISPR/Cas12a, as a powerful and programmable biosensing tool, has brought great convenience in visual detection of the target in a sequence-specific mode. Though fluorescent output is the predominant way of present visual methods, this strategy highly depends on cleaving fluorophore-/quencher-labeled oligonucleotides. Few research focuses on realizing fluorescent visual detection without DNA-labeling. Herein, we have proposed a CRISPR/Cas12a-based label-free fluorescent visual detection strategy. The basic principle of this strategy is that G-quadruplex can enhance the fluorescent emission of fluorescent ligands while dsDNA target-activated Cas12a make them impotent by disrupting the higher-ordered structure. After comparing four kinds of G-quadruplex-specific ligands, we selected Thioflavin T (ThT) to achieve the visual observation goal. The application feasibility was confirmed by combining with loop-mediated isothermal amplification (LAMP) for detection of Vibrio parahaemolyticus (V. parahaemolyticus), and it demonstrated a high sensitivity (1.36 × 102 copies) and specificity (among 12 kinds of bacteria). The method displayed similar performance as the real-time PCR for detection of real samples yet had lower requirement on the instrument. The signal output format could also distinguish Salmo salar from other seven kinds of sequence-similar Salmonidae. The findings and strategy proposed in this manuscript will expand the application of CRISPR/Cas12a-based label-free fluorescent analysis. © 2022 Elsevier B.V.

Keyword:

Fluorescence Ligands Oligonucleotides Polymerase chain reaction

Community:

  • [ 1 ] [Wang, Liu]State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro-products, Institute of Agro-product Safety and Nutrition, Zhejiang Academy of Agricultural Sciences, Hangzhou; 310021, China
  • [ 2 ] [Wang, Liu]Key Laboratory of Information Traceability for Agricultural Products, Ministry of Agriculture and Rural Affairs, Hangzhou; 310021, China
  • [ 3 ] [He, Fang]State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro-products, Institute of Agro-product Safety and Nutrition, Zhejiang Academy of Agricultural Sciences, Hangzhou; 310021, China
  • [ 4 ] [He, Fang]College of Food and Pharmaceutical Sciences, Ningbo University, Ningbo; 315800, China
  • [ 5 ] [Chen, Xueyun]State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro-products, Institute of Agro-product Safety and Nutrition, Zhejiang Academy of Agricultural Sciences, Hangzhou; 310021, China
  • [ 6 ] [Chen, Xueyun]College of Biological Science and Engineering, Fuzhou University, Fuzhou; 350108, China
  • [ 7 ] [He, Kaiyu]State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro-products, Institute of Agro-product Safety and Nutrition, Zhejiang Academy of Agricultural Sciences, Hangzhou; 310021, China
  • [ 8 ] [He, Kaiyu]Key Laboratory of Information Traceability for Agricultural Products, Ministry of Agriculture and Rural Affairs, Hangzhou; 310021, China
  • [ 9 ] [Bai, Linlin]State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro-products, Institute of Agro-product Safety and Nutrition, Zhejiang Academy of Agricultural Sciences, Hangzhou; 310021, China
  • [ 10 ] [Bai, Linlin]College of Biological Science and Engineering, Fuzhou University, Fuzhou; 350108, China
  • [ 11 ] [Wang, Qiang]State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro-products, Institute of Agro-product Safety and Nutrition, Zhejiang Academy of Agricultural Sciences, Hangzhou; 310021, China
  • [ 12 ] [Zhang, Fang]College of Biological Science and Engineering, Fuzhou University, Fuzhou; 350108, China
  • [ 13 ] [Xu, Xiahong]State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro-products, Institute of Agro-product Safety and Nutrition, Zhejiang Academy of Agricultural Sciences, Hangzhou; 310021, China
  • [ 14 ] [Xu, Xiahong]Key Laboratory of Information Traceability for Agricultural Products, Ministry of Agriculture and Rural Affairs, Hangzhou; 310021, China

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Source :

Sensors and Actuators B: Chemical

ISSN: 0925-4005

Year: 2022

Volume: 370

6 . 3 9 3

JCR@2018

CAS Journal Grade:1

Cited Count:

WoS CC Cited Count: 0

SCOPUS Cited Count: 7

ESI Highly Cited Papers on the List: 0 Unfold All

WanFang Cited Count:

Chinese Cited Count:

30 Days PV: 5

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