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author:

Sun, Hao (Sun, Hao.) [1] | Jiang, Qinghua (Jiang, Qinghua.) [2] | Huang, Yi (Huang, Yi.) [3] | Mo, Jin (Mo, Jin.) [4] | Xie, Wantao (Xie, Wantao.) [5] | Dong, Hui (Dong, Hui.) [6] | Jia, Yuan (Jia, Yuan.) [7]

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EI

Abstract:

Pandemics such as COVID-19 have exposed global inequalities in essential health care. Here, we proposed a novel analytics of nucleic acid amplification tests (NAATs) by combining paper microfluidics with deep learning and cloud computing. Real-time amplifications of synthesized SARS-CoV-2 RNA templates were performed in paper devices. Information pertained to on-chip reactions in time-series format were transmitted to cloud server on which deep learning (DL) models were preloaded for data analysis. DL models enable prediction of NAAT results using partly gathered real-time fluorescence data. Using information provided by the G-channel, accurate prediction can be made as early as 9 min, a 78% reduction from the conventional 40 min mark. Reaction dynamics hidden in amplification curves were effectively leveraged. Positive and negative samples can be unbiasedly and automatically distinguished. Practical utility of the approach was validated by cross-platform study using clinical datasets. Predicted clinical accuracy, sensitivity and specificity were 98.6%, 97.6% and 99.1%. Not only the approach reduced the need for the use of bulky apparatus, but also provided intelligent, distributable and robotic insights for NAAT analysis. It set a novel paradigm for analyzing NAATs, and can be combined with the most cutting-edge technologies in fields of biosensor, artificial intelligence and cloud computing to facilitate fundamental and clinical research. © 2023 Elsevier Ltd

Keyword:

Clinical research Cloud computing Deep learning Forecasting Health care Microfluidics Paper Time series Time series analysis

Community:

  • [ 1 ] [Sun, Hao]School of Mechanical Engineering and Automation, Fuzhou University, Fuzhou; 350116, China
  • [ 2 ] [Jiang, Qinghua]School of Life Science and Technology, Harbin Institute of Technology, Harbin; 150001, China
  • [ 3 ] [Huang, Yi]Fujian Provincial Collaborative Innovation Centre of High-End Equipment Manufacturing, Fuzhou; 350116, China
  • [ 4 ] [Mo, Jin]School of Mechanical Engineering and Automation, Fuzhou University, Fuzhou; 350116, China
  • [ 5 ] [Xie, Wantao]School of Mechanical Engineering and Automation, Fuzhou University, Fuzhou; 350116, China
  • [ 6 ] [Dong, Hui]School of Mechanical Engineering and Automation, Fuzhou University, Fuzhou; 350116, China
  • [ 7 ] [Dong, Hui]Centre for Experimental Research in Clinical Medicine, Fujian Provincial Hospital, 350001, China
  • [ 8 ] [Jia, Yuan]Sino-German College of Intelligent Manufacturing, Shenzhen Technology University, Shenzhen; 518118, China

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Source :

Biomedical Signal Processing and Control

ISSN: 1746-8094

Year: 2023

Volume: 83

4 . 9

JCR@2023

4 . 9 0 0

JCR@2023

ESI HC Threshold:35

JCR Journal Grade:1

CAS Journal Grade:3

Cited Count:

WoS CC Cited Count:

SCOPUS Cited Count: 4

ESI Highly Cited Papers on the List: 0 Unfold All

WanFang Cited Count:

Chinese Cited Count:

30 Days PV: 1

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