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author:

Wu, Hui (Wu, Hui.) [1] | He, Jin-song (He, Jin-song.) [2] | Zhang, Fang (Zhang, Fang.) [3] (Scholars:张芳) | Ping, Jianfeng (Ping, Jianfeng.) [4] | Wu, Jian (Wu, Jian.) [5]

Indexed by:

EI Scopus SCIE

Abstract:

An ultrafast and convenient method for visually detecting CaMV35S promoter amplicon (amplified products) was established by using CRISPR/Cas12a system coupled with a designed reaction vessel. Genetically modified (GM) soybean (Roundup Ready (R)) powders containing CaMV35S promoter were employed as detection targets, which were amplified by loop-mediated isothermal amplification (LAMP). The CRISPR/Cas12a system directly mixed with amplified products at 37 degrees C for 5 min and detection results could be clearly identified by the naked eye under UV light (254 nm). A designed reaction vessel was employed to make operation easier and could effectively prevent contamination at the source. The CRISPR/Cas12a detection system was optimized in our study and the concentration of magnesium ions was proved to be important for the work of CRISPR/Cas12a system. The optimized concentration range of magnesium ions was between 10 mM and 12 mM. Besides, the activated Bst DNA polymerase also had little effects on CRISPR/Cas12a system. The developed method could significantly distinguish the specific and non-specific amplification. And as low as 0.05% transgenic contents in soybean powders could be detected. It would have the potential to be complementary to instrument-based ultrahigh sensitive method and provide a new solution for on-site rapid detection. (C) 2019 Elsevier B.V. All rights reserved.

Keyword:

CaMV35S promoter CRISPR/Cas12a LAMP reaction Reaction vessel Visual detection

Community:

  • [ 1 ] [Wu, Hui]Zhejiang Univ, Coll Biosyst Engn & Food Sci, Hangzhou 310058, Zhejiang, Peoples R China
  • [ 2 ] [Ping, Jianfeng]Zhejiang Univ, Coll Biosyst Engn & Food Sci, Hangzhou 310058, Zhejiang, Peoples R China
  • [ 3 ] [Wu, Jian]Zhejiang Univ, Coll Biosyst Engn & Food Sci, Hangzhou 310058, Zhejiang, Peoples R China
  • [ 4 ] [He, Jin-song]Yunnan Agr Univ, Coll Food Sci & Technol, Kunming 650201, Yunnan, Peoples R China
  • [ 5 ] [Zhang, Fang]Fuzhou Univ, Coll Biol Sci & Engn, Fuzhou 350108, Fujian, Peoples R China

Reprint 's Address:

  • [Wu, Jian]Zhejiang Univ, Coll Biosyst Engn & Food Sci, Hangzhou 310058, Zhejiang, Peoples R China;;[He, Jin-song]Yunnan Agr Univ, Coll Food Sci & Technol, Kunming 650201, Yunnan, Peoples R China

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Source :

ANALYTICA CHIMICA ACTA

ISSN: 0003-2670

Year: 2020

Volume: 1096

Page: 130-137

6 . 5 5 8

JCR@2020

5 . 7 0 0

JCR@2023

ESI Discipline: CHEMISTRY;

ESI HC Threshold:160

JCR Journal Grade:1

CAS Journal Grade:2

Cited Count:

WoS CC Cited Count: 59

SCOPUS Cited Count: 63

ESI Highly Cited Papers on the List: 0 Unfold All

WanFang Cited Count:

Chinese Cited Count:

30 Days PV: 3

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