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author:

Zhang, Xiaorong (Zhang, Xiaorong.) [1] | Qiu, Hongzhao (Qiu, Hongzhao.) [2] | Zhong, Xinyi (Zhong, Xinyi.) [3] | Yi, Sirui (Yi, Sirui.) [4] | Jia, Ziyi (Jia, Ziyi.) [5] | Chen, Lanlan (Chen, Lanlan.) [6] (Scholars:陈岚岚) | Hu, Shanwen (Hu, Shanwen.) [7]

Indexed by:

EI Scopus SCIE

Abstract:

Helicobacter pylori infection has become a threat to the world populations. This leads to an urgent need of an efficient and convenient approach to accurately diagnose H. pylori infection. Saliva-based diagnoses are partic-ularly welcomed for their efficiency and convenience. Aiming at saliva sample analysis, we proposed a CRISPR/ Cas12a-assisted array, which had integrated H. pylori concentration detection and genotype screening functions. Single-nucleotide variations (SNVs) could be distinguished using the screening array with different probes, and an isothermal cycling strategy was combined with the trans-cleavage activity of Cas12a for signal amplification to improve accuracy of the diagnosis. As a demonstration, the SNV screening array was fabricated by utilizing the hybridization efficiency difference caused by mismatched bases. The array was able to successfully distinguish between ten H. pylori genotypes, and combined with the successful SDA biosensing, it had a LOD of as low as 60 fM. It was also able to diagnose H. pylori infection in saliva samples from infected patients. Together, the developed array has a potential in large-scale clinical screening and is a promising tool for the diagnosis and prevention of H. pylori infection-related diseases.

Keyword:

Cas12a CRISPR Helicobacter pylori Saliva

Community:

  • [ 1 ] [Zhang, Xiaorong]Fujian Med Univ, Sch Publ Hlth, Dept Hlth Inspect & Quarantine, Fuzhou 350122, Fujian, Peoples R China
  • [ 2 ] [Qiu, Hongzhao]Fujian Med Univ, Sch Publ Hlth, Dept Hlth Inspect & Quarantine, Fuzhou 350122, Fujian, Peoples R China
  • [ 3 ] [Zhong, Xinyi]Fujian Med Univ, Sch Publ Hlth, Dept Hlth Inspect & Quarantine, Fuzhou 350122, Fujian, Peoples R China
  • [ 4 ] [Yi, Sirui]Fujian Med Univ, Sch Publ Hlth, Dept Hlth Inspect & Quarantine, Fuzhou 350122, Fujian, Peoples R China
  • [ 5 ] [Jia, Ziyi]Fujian Med Univ, Sch Publ Hlth, Dept Hlth Inspect & Quarantine, Fuzhou 350122, Fujian, Peoples R China
  • [ 6 ] [Hu, Shanwen]Fujian Med Univ, Sch Publ Hlth, Dept Hlth Inspect & Quarantine, Fuzhou 350122, Fujian, Peoples R China
  • [ 7 ] [Chen, Lanlan]Fuzhou Univ, Coll Chem, Key Lab Anal & Detecting Technol Food Safety MOE, Fuzhou 350002, Fujian, Peoples R China

Reprint 's Address:

  • [Hu, Shanwen]Fujian Med Univ, Sch Publ Hlth, Dept Hlth Inspect & Quarantine, Fuzhou 350122, Fujian, Peoples R China;;

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Source :

ANALYTICA CHIMICA ACTA

ISSN: 0003-2670

Year: 2022

Volume: 1239

6 . 2

JCR@2022

5 . 7 0 0

JCR@2023

ESI Discipline: CHEMISTRY;

ESI HC Threshold:74

JCR Journal Grade:1

CAS Journal Grade:1

Cited Count:

WoS CC Cited Count: 3

SCOPUS Cited Count: 4

ESI Highly Cited Papers on the List: 0 Unfold All

WanFang Cited Count:

Chinese Cited Count:

30 Days PV: 4

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