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author:

Zhang, J. (Zhang, J..) [1] | Wang, J. (Wang, J..) [2] | Du, Y. (Du, Y..) [3] | Li, G. (Li, G..) [4] | Liu, X. (Liu, X..) [5] | Pan, P. (Pan, P..) [6] | He, Z. (He, Z..) [7] | Cheng, R. (Cheng, R..) [8] | Lai, Q. (Lai, Q..) [9] | Shao, Z. (Shao, Z..) [10] | Dong, C. (Dong, C..) [11]

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Scopus

Abstract:

The poles of the Earth harbour many novel micro-organisms that have not yet been isolated and identified. Here, a Gram-stain-negative, motile, aerobic and rod-shaped bacterial strain, designated as wDCs-4T, was isolated from surface seawater collected from the Weddell Sea in Antarctica. It grows at 4–40 °C (optimum 10–15 °C), pH 4–8 (optimum 7) and in the presence of 0–4% NaCl (w/v, optimum 0.5–1%). The complete 16S rRNA gene of strain wDCs-4T had maximum sequence identity with Oceanobacter mangrovi SM2-42T (97.2%), followed by Thalassolituus oleivorans MIL-1T (96.5%) and Oceanobacter kriegii 197T (96.2%). Phylogenetic analyses based on the 16S rRNA gene and genome sequences showed that strain wDCs-4T was closely clustered with the members of the genus Oceanobacter and formed an independent clade, which could be considered a mono-phyletic taxon. The average nucleotide identity values between strain wDCs-4T and the members of the genera Oceanobacter and Thalassolituus were 77.7–78.1 and 77.4–80.5%, respectively. The corresponding digital DNA‒DNA hybridization values are 19.5–20.1 and 20.5–22.4%, respectively. The major fatty acids (>5%) of strain wDCs-4T comprised summed feature 5 (C18:0 ante/C18:2 ω6,9c or C18:2 ω6,9c/C18:0 ante) and C16:0. The predominant respiratory was Q-8. The polar lipid profile consisted of phosphatidylethanolamine, phosphatidylglycerol, aminolipids and unknown polar lipids. The draft genome size was 4.58 Mbp, with a DNA G+C content of 53.4 mol%. On the basis of polyphasic analyses, strain wDCs-4T represented a novel species in the genus Oceanobacter, for which the name Oceanobacter antarcticus sp. nov. was proposed. The type strain was wDCs-4T (=MCCC 1A20726T=KCTC 8314T). © 2025 The Authors.

Keyword:

Antarctica Oceanobacter antarcticus sp. nov polyphasic taxonomy surface seawater Weddell Sea

Community:

  • [ 1 ] [Zhang J.]School of Advanced Manufacturing, Fuzhou University, Jinjiang, 362251, China
  • [ 2 ] [Zhang J.]Key Laboratory of Marine Genetic Resources, Third Institute of Oceanography, Ministry of Natural Resources of China, Key Laboratory of Marine Genetic Resources of Fujian Province, Xiamen, 361005, China
  • [ 3 ] [Wang J.]Key Laboratory of Marine Genetic Resources, Third Institute of Oceanography, Ministry of Natural Resources of China, Key Laboratory of Marine Genetic Resources of Fujian Province, Xiamen, 361005, China
  • [ 4 ] [Du Y.]Key Laboratory of Marine Genetic Resources, Third Institute of Oceanography, Ministry of Natural Resources of China, Key Laboratory of Marine Genetic Resources of Fujian Province, Xiamen, 361005, China
  • [ 5 ] [Li G.]Key Laboratory of Marine Genetic Resources, Third Institute of Oceanography, Ministry of Natural Resources of China, Key Laboratory of Marine Genetic Resources of Fujian Province, Xiamen, 361005, China
  • [ 6 ] [Liu X.]Key Laboratory of Marine Genetic Resources, Third Institute of Oceanography, Ministry of Natural Resources of China, Key Laboratory of Marine Genetic Resources of Fujian Province, Xiamen, 361005, China
  • [ 7 ] [Pan P.]School of Advanced Manufacturing, Fuzhou University, Jinjiang, 362251, China
  • [ 8 ] [Pan P.]Key Laboratory of Marine Genetic Resources, Third Institute of Oceanography, Ministry of Natural Resources of China, Key Laboratory of Marine Genetic Resources of Fujian Province, Xiamen, 361005, China
  • [ 9 ] [He Z.]Key Laboratory of Marine Genetic Resources, Third Institute of Oceanography, Ministry of Natural Resources of China, Key Laboratory of Marine Genetic Resources of Fujian Province, Xiamen, 361005, China
  • [ 10 ] [He Z.]School of Marine Sciences, China University of Geosciences, Beijing, 100083, China
  • [ 11 ] [Cheng R.]Key Laboratory of Marine Genetic Resources, Third Institute of Oceanography, Ministry of Natural Resources of China, Key Laboratory of Marine Genetic Resources of Fujian Province, Xiamen, 361005, China
  • [ 12 ] [Lai Q.]School of Advanced Manufacturing, Fuzhou University, Jinjiang, 362251, China
  • [ 13 ] [Lai Q.]Key Laboratory of Marine Genetic Resources, Third Institute of Oceanography, Ministry of Natural Resources of China, Key Laboratory of Marine Genetic Resources of Fujian Province, Xiamen, 361005, China
  • [ 14 ] [Lai Q.]Xiamen Ocean Vocational College, Xiamen, 361005, China
  • [ 15 ] [Shao Z.]School of Advanced Manufacturing, Fuzhou University, Jinjiang, 362251, China
  • [ 16 ] [Shao Z.]Key Laboratory of Marine Genetic Resources, Third Institute of Oceanography, Ministry of Natural Resources of China, Key Laboratory of Marine Genetic Resources of Fujian Province, Xiamen, 361005, China
  • [ 17 ] [Dong C.]School of Advanced Manufacturing, Fuzhou University, Jinjiang, 362251, China
  • [ 18 ] [Dong C.]Key Laboratory of Marine Genetic Resources, Third Institute of Oceanography, Ministry of Natural Resources of China, Key Laboratory of Marine Genetic Resources of Fujian Province, Xiamen, 361005, China

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Source :

International Journal of Systematic and Evolutionary Microbiology

ISSN: 1466-5026

Year: 2025

Issue: 2

Volume: 75

2 . 0 0 0

JCR@2023

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ESI Highly Cited Papers on the List: 0 Unfold All

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30 Days PV: 0

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