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author:

Chen, Yahong (Chen, Yahong.) [1] | Lin, Shujin (Lin, Shujin.) [2] | Lai, Jinglan (Lai, Jinglan.) [3] | Wang, Qiaowen (Wang, Qiaowen.) [4] | Lin, Jing (Lin, Jing.) [5] | Ao, Wen (Ao, Wen.) [6] | Ye, Hanhui (Ye, Hanhui.) [7] | Han, Xiao (Han, Xiao.) [8] (Scholars:韩霄)

Indexed by:

Scopus SCIE

Abstract:

The HIV latent reservoir is the main obstacle to the eradication of AIDS. Recent studies have shown that the RNA m6A is involved in the regulation of HIV-1 replication. However, no relevant study has reported the relationship between RNA m6A and HIV latent reservoir. For this purpose, peripheral blood mononuclear cell (PBMC) was collected from 36 HIV-infected patients at 1, 24, and 48 weeks after treatment initiation. The number of CD4+ and CD8+ T cells was detected by flow cytometry. Amount of HIV DNA in the PBMC samples one week after treatment initiation was detected by Q-PCR. The expression levels of 23 RNA-m6A-related genes were detected by Q-PCR and Pearson's correlation analysis was performed. Results showed that there was a negative correlation between HIV DNA concentration and the number of CD4+ T cells (r=-0.32, p=0.05; r=-0.32, p=0.06) and a positive correlation with the number of CD8+ T cells (r=0.48, p=0.003; r=0.37, p=0.03). Furthermore, a negative correlation was observed between HIV DNA concentration and the CD4+/CD8+ T cell ratio (r=-0.53, p=0.001; r=-0.51, p=0.001). RNAm6A related genes which correlated with HIV DNA concentration includedALKBH5 (r=-0.45, p=-0.006), METTL3 (r=0.73, p=2.76e-7), METTL16 (r=0.71, p=1.21e2.76e-06), YTHDF1 (r=0.47, p=0.004). Moreover, they have different degrees of correlation with numbers ofCD4+ and CD8+ T cell subsets, and the CD4+/CD8+T cell ratio. In addition, the expression of RBM15 was not correlated with HIV DNA concentration but was significantly negatively correlated with the number of CD4+T cells (r=-0.40, p=0.02). In conclusion, the expression ofALKBH5, METTL3, and METTL16 is correlated with the HIV DNA level, the levels of CD4+ and CD8+ T cell counts, and the CD4+/CD8+ T cell ratio. RBM15 is independent of HIV DNA level and negatively correlated with the number of CD4+T cells.

Keyword:

ALKBH5 HIV latent reservoir METTL16 METTL3 RNA m6A

Community:

  • [ 1 ] [Chen, Yahong]Fujian Med Univ, Infect Dept, Mengchao Hepatobiliary Hosp, Fuzhou 350025, Peoples R China
  • [ 2 ] [Lin, Shujin]Fujian Med Univ, Infect Dept, Mengchao Hepatobiliary Hosp, Fuzhou 350025, Peoples R China
  • [ 3 ] [Lai, Jinglan]Fujian Med Univ, Infect Dept, Mengchao Hepatobiliary Hosp, Fuzhou 350025, Peoples R China
  • [ 4 ] [Wang, Qiaowen]Fujian Med Univ, Infect Dept, Mengchao Hepatobiliary Hosp, Fuzhou 350025, Peoples R China
  • [ 5 ] [Lin, Jing]Fujian Med Univ, Infect Dept, Mengchao Hepatobiliary Hosp, Fuzhou 350025, Peoples R China
  • [ 6 ] [Ao, Wen]Fujian Med Univ, Infect Dept, Mengchao Hepatobiliary Hosp, Fuzhou 350025, Peoples R China
  • [ 7 ] [Ye, Hanhui]Fujian Med Univ, Infect Dept, Mengchao Hepatobiliary Hosp, Fuzhou 350025, Peoples R China
  • [ 8 ] [Han, Xiao]Fuzhou Univ, Coll Biol Sci & Engn, Fuzhou 350025, Peoples R China

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Source :

CELLULAR AND MOLECULAR BIOLOGY

ISSN: 0145-5680

Year: 2023

Issue: 4

Volume: 69

Page: 125-132

1 . 5

JCR@2023

1 . 5 0 0

JCR@2023

ESI Discipline: MOLECULAR BIOLOGY & GENETICS;

ESI HC Threshold:47

JCR Journal Grade:4

CAS Journal Grade:4

Cited Count:

WoS CC Cited Count: 4

SCOPUS Cited Count:

ESI Highly Cited Papers on the List: 0 Unfold All

WanFang Cited Count:

Chinese Cited Count:

30 Days PV: 2

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